Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDNHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSEIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSE----KIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKTFQDAVDYLKKLQ |
| 3M6A Chain:A ((422-531)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVS--REVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNE---------------KDIEDIPESVREGLTFILASHLDEVLEHALV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M6A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39860 for 755 contacts (-52.8/contact) +
2D Compatibility (PS) -11624 + (NN) -7487 + (LL) 15140
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -49631.0 ( -65.74 by residue)
QMean score : 0.408
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