Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEKKIDFKKEEKKFYAPKRKPERIFVPE------------------------MNFLMVDGKGDPDGEEYQKAV---QSLYAIAYTIKMSKM-----------GETRLNG----YADFVVPP-LEGFWWSEE---KFDLKDRDAWL-WTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPFSEEVKTVA-ELHQFMETEGLHND-TGAVRKHHEIYLSDPRKADPEKMKTILRLPVS |
| 2VVE Chain:A ((3-254)) | --QEQTTKSRDVNSFQIPLRDGVRELLPEDASRNRASIKSPVDIWIGGENMTALNGIVDGGRKFEAGQEFQINTFGSVNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPFFDIDVPPELDGVPFSLKARVRHKSKGVDGLGDYTSISVKPAFYITEGDE-TTDTLIKYTSYGSTGSHSGYDFDDNTLDVMVTLSAGVHRVFPVETELDYDAVQEVQHDWYDESFTTFIEVYSDDPLLTVKGYAQILMERT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 46106 for 1274 contacts (36.2/contact) +
2D Compatibility (PS) -20129 + (NN) 13412 + (LL) 580
1D Compatibility (HY) -2800 + (ID) 2300
Total energy: 34869.0 ( 27.37 by residue)
QMean score : 0.138
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