Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLTEMLQIKYPILQGAMAQIATYELASAVSNAGGLGIIASGGMSADALREQIRLCKEKTTKPFAVNIMLMMPNC--------------------------------------PELVDVIIEEDVRVVTTGAGTP-KPFMEKFKAAGIKVIAVIPSVKIAQKMEEIGVDAVVAEGTEAGGHVG---------ETTTMALVRQVVSAVNIPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEECPVPASFKQAVLDATDTSTTVTGRRNGAPVRSIKNPMIQKYVELENENASRDKLEELTLGSLRKAVHEGDVENGSVMAGQICGMLTEIRSTSDIIENLMKESKQVASNLVIQ |
4QIT Chain:B ((11-291)) | --FTRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGSRGVFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMF-------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QIT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -189210 for 1994 contacts (-94.9/contact) +
2D Compatibility (PS) -25604 + (NN) -13092 + (LL) 5764
1D Compatibility (HY) -12000 + (ID) 4600
Total energy: -238742.0 ( -119.73 by residue)
QMean score : 0.561
|
|
|