Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVEQLVSNAAILLAGFYIISLVYKEPITKELSTNKKIVIGIWAGLLGFALMVFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAIIISASRFLLSVNSAAIMAAVVMMLIGIITAIFGKRIEKFKIWGVFILNIIACSFVVINLHLILARESHFWINMTVFVLIALVIGAVSAGLMSNMIKSKQLFQKYEQDSTLDYLTKLSNVRQFDEKINHVMDAGSR---QVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSE-AFRNGGEEFSIVLLDCPIEKGNFFAEQVRRETE----EYDFMIPSGQVVKITISVGVSS--SKDGANTSEGLFKSADEALYKAKLTGRNQVCIADGN |
| 3BRE Chain:B ((174-336)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDQPRPGSH---LTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69338 for 1193 contacts (-58.1/contact) +
2D Compatibility (PS) -17142 + (NN) -9375 + (LL) 19760
1D Compatibility (HY) -7600 + (ID) 3450
Total energy: -87145.0 ( -73.05 by residue)
QMean score : 0.567
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