Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGEKLFQEGAEYRVLQSSGSIKGFGVVVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQSTKLTKAMNM-NKFLIISFWDSEVFFHDWKKSPLSKEITNIMRKNNTQSGFSHEDIYHYPEFSHDAK
1X7V Chain:A ((4-85))
---------------------------------------------------------------STPLTLIATITAAPGHAEALERELRALVAPSRAEAGCLQYDLHQDRHDSHLFYMIEQWRDDAALERHQNTEHFLRFSRGNEA-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1X7V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39942 for 508 contacts (-78.6/contact) +
2D Compatibility (PS) -8906 + (NN) -3172 + (LL) 5136
1D Compatibility (HY) 1600 + (ID) 300
Total energy: -45584.0 ( -89.73 by residue)
QMean score : 0.417
(partial model without unconserved sides chains):
PDB file :
Tito_1X7V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X7V-query.scw
PDB file :
Tito_Scwrl_1X7V.pdb
: