Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHLIPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD
3IMI Chain:D ((9-146))
-DNCIFCKIIDGQILCSKVYEDEHVLAFLDISQVTKGHTLVIPKVHKQDIFALTPEIASHIFSVVPKIANAIKAEFNPVGFNLLNNNGEKAGQTVFHFHLHLIPRYGENDGFGAVWKSHQNEYTMENLQNIASTIANSV-
General information:
TITO was launched using:
RESULT:
Template:
3IMI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65002 for 865 contacts (-75.1/contact) +
2D Compatibility (PS) -14831 + (NN) -5640 + (LL) 132
1D Compatibility (HY) -14800 + (ID) 3800
Total energy: -103941.0 ( -120.16 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3IMI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IMI-query.scw
PDB file :
Tito_Scwrl_3IMI.pdb
: