Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNANGNLKKCPITISSYTLGTE----VSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMARLFGVKHINCGLLEKIPEEQIIVALGELCDRA---EELIIGLEFMPYSGVADLQAAWRVAEACG--RDNAQLICDTWHWARANQTAES-IKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYG-DTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR |
| 1YX1 Chain:A ((5-254)) | ---------LHPVSISLSSYGADLVRSRGQASFLPLLAMAGAQRVELREELFAG----PPDTEALTAAIQLQGLECVFSSPLELWRE-D--GQLN-PELEPTLRRAEACGAGWLKVSLGLLPEQPD----LAALGRRLARHG-LQLLVENDQTPQGGRIEVLERFFRLAERQQLDLAMTFDIGNWRWQEQAADEAALR-LGRYVGYVHCKAVIRNRD------GKLVAVPPSAADLQYWQRLLQHFPEG----VARAIEYPLQGD---DLLSLSRRHIAALARLGQ--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YX1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102175 for 1940 contacts (-52.7/contact) +
2D Compatibility (PS) -25457 + (NN) -9461 + (LL) 3512
1D Compatibility (HY) 400 + (ID) 1550
Total energy: -134731.0 ( -69.45 by residue)
QMean score : 0.483
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