Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNYLSLSEEVKQAKAEGKAIVALESTIISHGMPYPQNVEMARDVEQIIRDNGAVPATIALIDGKIKIGLSDEELELFAKSSNVAKVSRRDIGYLIATKQLGATTVAATMICAELAEIGIFVTGGIGGVHRGAETTMDVSADLEELAKTNVAVVCAGAKSILDLNLTMEYLETKGVPVIGYQTDVLPAFYTRSSDVELTLRADTPEVIAESLKAKWDLQIEGGAVITNPIPEEFAMDEKVINDVIQTALKEAEENHIHGKDVTPFLLGKVKELTDGKSLEANIELVKHNALIGTQIAVAYQNI
1VKM Chain:A ((14-296))---------IIESRIEKGKPVVGMETTVFVHGLPRKEAIELFRRAKEISREKGFQLAVIGILKGKIVAGMSEEELEAMMRE-GADKVGTREIPIVVAEGKNAATTVSATIFLSRRIGIEVVVTGGTGGVHPG---RVDVSQDLTEMSSSRAVLVSSGIKSILDVEATFEMLETLEIPLVGFRTNEFPLFFSRKSGRRVP-RIENVEEVLKIYESMKEMELEKTLMVLNPVPEEYEIPHDEIERLLEK-----IELEVEGKEVTPFLLKKLVEMTNGRTLKANLALLEENVKLAGEIAVKLKR-


General information:
TITO was launched using:
RESULT:

Template: 1VKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -175858 for 2519 contacts (-69.8/contact) +
2D Compatibility (PS) -30591 + (NN) -9665 + (LL) 1968
1D Compatibility (HY) -23600 + (ID) 5000
Total energy: -242746.0 ( -96.37 by residue)
QMean score : 0.611

(partial model without unconserved sides chains):
PDB file : Tito_1VKM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VKM-query.scw
PDB file : Tito_Scwrl_1VKM.pdb: