Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDMVKNEWKKLFKNKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDKPVDYNGQTMDVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKYYMIVTIPKDFSKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDKLNAGVSTLAAGVGPLKDGVAALDGGATKLAS-GVSTYTSGVDTLAGGINQAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDGNLTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLTFIKSNANFDAEAIKSKINATAGVSAEDKQKIIDAIQADLDKETQKSATQVATVEQLQSGLSGLDLAAIQTQVTELQTGVAKISAGYQAV--HGGTNEAFNSIHQAINGSG-SQTLLGGANQLTAGLKSAQAGSAKLVAGTNQLNSQVPTLTSGVGQLAAGSASMENGLSKLNDGGNKLASNSGALRSGATELQGGTNQLAAKVPTLAGGVNQLQAGSNQLAGGLNQLSANSPKLVSGVGQLADGSSKIADGSSKLANGSFQLGDGLTKLTDGSTELTDKLADGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNYGHALAPYVLSLALYVGALVFNFIMPIRRVSMEGQPAYKWWLSKLSLGFVAAVAMALLEGGIMIALGLRPDSIVEFFGTAIITALAYMFLIMLLAMTFDNPGRFIAMVLLIVQLAGSGGTFPMPLTGWFFNLIHPFLPMTYSIYAFRESLAAGMGPNVYSMSMLILTIIMVACVGLLYLSMSHLKKRHDAHESALDDNQKLMALEN |
| 4DVZ Chain:A ((308-829)) | ------------------------------------------------------------------------------------------------------------------------------------LMGSHN--GKVSLLYAGDKHDWNATVGYKDNVATLINVHMK-NGSGLVIAGGEKGINNPSFYLYKEDQLTGS----QRALSQEEIRNKVDFMEFLAQNNTKLDNLSEKEKEK---FQNEIEDFQKDSKAYLDALGNDRIAFVSKKDTKHSALITEFNNGDLSYTLKDY---EKNVTLQGSLKHDGVMFVDYSFNKVAVFN-LPDL-NNLAITSFVRRNLENKLTAKGLSLQEANKLIKDFLSSNKELAGKALNFNKAVAEAKST--GNYDEVKKAQKDLEKSLRKREHLEKEVEKKLESKS-GNKKAQANSQKDEIFALINKEANRDARAIAYTQNLKGIK-RELSDKLEKISKDLKDFSKSFDEFKNFSKAEETLKALKGSVKDLGINPEWISKVENLNAALNEFKNGDFSKVTQAKSDLENSVKDVIINQKVTDKVDNLNQAVSVAKAMGDF-----SRVEQVLADLKNFSKEQLAQQAQK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 118288 for 3201 contacts (37.0/contact) +
2D Compatibility (PS) -47656 + (NN) -6412 + (LL) 32568
1D Compatibility (HY) -4400 + (ID) 3000
Total energy: 89388.0 ( 27.93 by residue)
QMean score : 0.247
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