Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKDLLYTEEHEWV------KADDGSYVIGITDFAQDQLGDIVFVELPEVGDTVTKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILKLEEVEEADVKALLSSDDYEKVLD
3TZU Chain:B ((10-130))
--IPGDRSYTADHEWIDIAPGAATPDGPVRVGITSVAVEALGDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVNTAAVDDPATIATDPYGAGW---LYSVQPTAVGELLTASEY-----
General information:
TITO was launched using:
RESULT:
Template:
3TZU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26051 for 889 contacts (-29.3/contact) +
2D Compatibility (PS) -12308 + (NN) -5602 + (LL) 1084
1D Compatibility (HY) -10400 + (ID) 2750
Total energy: -56027.0 ( -63.02 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_3TZU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZU-query.scw
PDB file :
Tito_Scwrl_3TZU.pdb
: