Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIHQYFQSLSDLENIYRCPGK-FKYQEHSVAEHSYKVTSIAQFFGAVEEEAGNEVNWRALYEKALNHDYSELFIGDIKTPVKYATTELREMLSEVEESMTKNFIEREIP----ETYQPIYRHLLKEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPENIFV---EIYSEALATIYEYREMASVKYFLKEILPDMLAEKGIEKTELPQLTTEITTKALRDA
3KH1 Chain:A ((12-195))
-AQMSFVVEIDKLKTILRQTLLTDSSRRENDAEHSWHIATMAFLLAEYA---DEAVQIGRVARMLLIHDIVEIDAGDTFIHDEA-------DKEERERKAAAR-LFGLLPPDQAAEYSALWQEYE---ARETADARFADALDRLQPLLHNFETEGGTWK--PHGVTRAKVDKLLPRIE--AGSKRLGAYARALVDEAVRR-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3KH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27415 for 1282 contacts (-21.4/contact) +
2D Compatibility (PS) -18095 + (NN) -6894 + (LL) 3460
1D Compatibility (HY) -2800 + (ID) 1250
Total energy: -52994.0 ( -41.34 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_3KH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KH1-query.scw
PDB file :
Tito_Scwrl_3KH1.pdb
: