Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKDVGIDLGTANVLIHVKGRG-I--------VVNEPAVVAINNKTGQVLAVGTEARDMVGRTPGDITAI-KPM--------KDGVIADFDIVQEMLRFFIQKLNLKTFFSRPRILICCPTNITSVEQKAIREVAEKSGGKQVFLEEEPKVAAIGAGMEIFEPSGNMIIDIGGGTADVAVLSMGDIVT-----SQSVKVAGNKWDADILNYVKRKYNLLI-------------GERTAENIKVTIGTACQGAKEEKMEIRG--RDLVSGLPKTISITSSEVEEAIHDSLHLMVLAAKQVLEQTPPELSADIIDRGIIMTGGGSLLHGLDELMSEQLKVPVLITENPLDVVALGTGILLDSLTNKKRNRF |
| 2V7Y Chain:A ((1-351)) | MSKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKN---GERLVGEVAKRQAITNPNTIISIKRHMGTDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQT----QISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLT-PADI--DKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVI-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142853 for 2583 contacts (-55.3/contact) +
2D Compatibility (PS) -33678 + (NN) -15821 + (LL) 1016
1D Compatibility (HY) -7200 + (ID) 3800
Total energy: -202336.0 ( -78.33 by residue)
QMean score : 0.411
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