Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG |
2EJW Chain:B ((4-283)) | ----LKIALLGGGTVGSAFYNLVLERAEELSAF-GVVPRFLGVLVRDPRKPRAIPQE--LLRAEPFDLL---EADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEGL--IYHEASVMAGTPAL-SFLETLRGSELLELHGILNGTTLYILQEME-KGRTYAEALLEAQRLGYAEADPTLDVEGIDAAHKLTLLARLLVDPGFPFAEVEAQGIARLTPEVLQKAEARGERVRLVASLFGEGGRWRAAVAPRRLPQDHPLA--RARGNALWVRARPLGEAF------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175561 for 2274 contacts (-77.2/contact) +
2D Compatibility (PS) -30402 + (NN) -6994 + (LL) 9220
1D Compatibility (HY) -22800 + (ID) 5200
Total energy: -231737.0 ( -101.91 by residue)
QMean score : 0.479
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