Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEKQVALYIAVSLDGYIADENGSVEWLESIDSEGDAGYEAFFDNVDTVVMGRTTYQQIFSLTDTFPYSKKDVYVFSNTKAGTKDEYADFVAGTVDTWLNNID---GEKIWLVGGAKLVQQFLKERAIDRFVITIAPIILGKGIPLFEEDQ-EHALELEEVTRFG-Q-FAQLTYKNLEEN
1CZ3 Chain:A ((1-164))
---AKVIFVLAMDVSGKIASSV--ESWSSFE-D--RKNFRKITTEIGNVVMGRITFEEIGR-----PLPERLNVVLTRRPKTSNNPSLVFFNGSPADVVKFLEGKGYERVAVIGGKTVFTEFLREKLVDELFVTVEPYVFGKGIPFFDEFEGYFPLKLLEMRRLNERGTLFLKYSVE---
General information:
TITO was launched using:
RESULT:
Template:
1CZ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104387 for 1172 contacts (-89.1/contact) +
2D Compatibility (PS) -16834 + (NN) 205 + (LL) 404
1D Compatibility (HY) -14800 + (ID) 1950
Total energy: -137362.0 ( -117.20 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_1CZ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CZ3-query.scw
PDB file :
Tito_Scwrl_1CZ3.pdb
: