Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKLSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASLRQGTHK-----VKNRSEVRGGGRK-PWRQKGTGRARQGSIRSPQWRGGGVVFGPTP-RSYAYKLPKKVRRLAIKSILSSKVNEE------------K--LVVLEGLTFDAPKTKEFAAFLKNISVDT--------------------------KALIVVAGESENVELSARNLQGITVIPAESISVLEVAK----HDKLIITKAAVEKVEEVLA |
| 1VQ8 Chain:C ((4-246)) | -MQATIYDLDGNTDGEVDLP-DVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKLDGRAR----RVPQAVKGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHEFDRDEVPVVVSDDFE-DLVKTQEVVSLLEALDVHADIDRADETKIKAGQGSARGRKYRRPASILFVTSD---EPSTAARNLAGADVATASEVNTEDLAPGGAPGRLTVFTESALAEVAER-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7887 for 1254 contacts (6.3/contact) +
2D Compatibility (PS) -19571 + (NN) 2867 + (LL) 776
1D Compatibility (HY) 15200 + (ID) 650
Total energy: 6509.0 ( 5.19 by residue)
QMean score : 0.190
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