Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRFMQIWKPAVIGFLLLTLVCGVLYPGVVTVFAGVAFHDKANGSIIEEKLADGTTGKVGSAEIGQTFTEPEYLIGRAASDGVATNLNPTSEEQKQLVEKRIAWWHKLDPTNNRVIPMDLVTASASGVDPDISEAAAAYQVDRISRERGISTKEVKEIIAEHTSNRLLGFWGEPTVNVLQVNLALDRLKM |
| 1S3A Chain:A ((27-97)) | ---------------------------------------------------------------------------------------SPGSQGVRDFIEKRYVELKKANP----DLPILIRECS--DVQPKLWARYAFGQ-ETNVPLNNFSADQVTRALENVLSG------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1S3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 18528 for 458 contacts (40.5/contact) +
2D Compatibility (PS) -7632 + (NN) -3181 + (LL) 8424
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 13339.0 ( 29.12 by residue)
QMean score : 0.381
|
|
|