Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKAIFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDPKTEVLLIAGARRQHVVETIRPALAAGKSVLCDRFMDSSLAYQGAGRDMNMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKGREVNRLDKEDITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQLA
4QG7 Chain:B ((4-202))
----FITFEGPEGSGKTTVINEVYHRLVK-DYDVIMTREPGGVPTGEEIRKIVLE-GND-MDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKN-S------DQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYL-
General information:
TITO was launched using:
RESULT:
Template:
4QG7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67663 for 1546 contacts (-43.8/contact) +
2D Compatibility (PS) -21240 + (NN) -10365 + (LL) 1872
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -119696.0 ( -77.42 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_4QG7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QG7-query.scw
PDB file :
Tito_Scwrl_4QG7.pdb
: