Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MESRSNKFGRKKNKKIGKLHKSYDAYLMEL------IEVTQENWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
3J6V Chain:U ((1-87))
MAKHLKFIARTVMVQEGNVEGAYRTLNRILTMDGLIEDIKRRRYYEKPCRRRQRESYETCRRIYNMEMARKINFLMRKNRADPWQGC
General information:
TITO was launched using:
RESULT:
Template:
3J6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10865 for 308 contacts (35.3/contact) +
2D Compatibility (PS) -8401 + (NN) -885 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -1671.0 ( -5.43 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_3J6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J6V-query.scw
PDB file :
Tito_Scwrl_3J6V.pdb
: