Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLDRVTLEDIEVNLKAEDWREAIQMSARLLLERGAI-KESYIDGMIQSVENNGPYIVIAKHIALAHTRPEFGVIHGGLTFATLADGVAFGSDMFDPVKLIITLAATDS--ESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG
2A0J Chain:A ((4-147))
-IGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADVFECLFAREKLGSTGL--GQGVAIPHGRHA-GVKQATGAFIRTREPVGFDAPDGKPVSLIFILLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEVRAILT---
General information:
TITO was launched using:
RESULT:
Template:
2A0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108173 for 1083 contacts (-99.9/contact) +
2D Compatibility (PS) -15036 + (NN) -5162 + (LL) 732
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -137089.0 ( -126.58 by residue)
QMean score : 0.543
(partial model without unconserved sides chains):
PDB file :
Tito_2A0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A0J-query.scw
PDB file :
Tito_Scwrl_2A0J.pdb
: