Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIIFAKEDDLEEIISSHPKILLNFWAEWCAPCRCFWPTLEQFAEMEEGNVQVVKINVDKQRALAQKFDVKGIPNSLVLVDGEIKGAIAGIVSCDELRSRFKSLAK
3TCO Chain:C ((11-108))
-------EENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKYL-
General information:
TITO was launched using:
RESULT:
Template:
3TCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71492 for 689 contacts (-103.8/contact) +
2D Compatibility (PS) -10877 + (NN) -4674 + (LL) 1164
1D Compatibility (HY) -10400 + (ID) 1600
Total energy: -97879.0 ( -142.06 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_3TCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TCO-query.scw
PDB file :
Tito_Scwrl_3TCO.pdb
: