Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEMDPNTDLSSVTRPRATPVLTTFQFDSGKVGHIWTTFSEDQIDLNFACPEVLYKMIDVLMFYLEEGAEYVRLDAVGFMWKVPGTSSIHLEETHEIVKLFRDLVDIAAPGTIIITETNVPHVDNISYFGN---GEKEAHMVYQFPLPPLVLHAIHHGNAKFLRNWAKNLEL-PEGKRTFFNFLASHDGIGLNPVRGIIPEAE-----ILALVNDLEEEGALVSYKQNPDGSKSPYE----INVTYMDALSKQA-------DTDDLRLARFLVAHAVLMSIPGVPAVYVQSILGSRNDYLGVE---ATSHNRSINRKKYDLAEITAELEQRGSLRKATYDALTKLISTRKAESLFHPEIPMEVLE-STAELFVVKRSSDAESIILIHNLSEKEVSYSLDSG---VYTN-LYKGSTVTGSDSIKLSGYEFCWLKTKNYREEQK |
| 3CZG Chain:A ((228-638)) | ---------------------GNFTWVDDTAQWMWTTFYPYQWDLNWSNPAVFGDMALAMLRLANLGVEAFRLDSTAYLWKRIGTDCMNQSEAHTLLVALRAVTDIVAPAVVMKAEAIVPMTQLPPYFGSGVDEGHECHLAYHSTLMAAGWSALALQRGDILHNVIAHSPPLPR-HCAWLSYVRCHDDIGWNVLQHEACGNAAQPPFSLRDVARFYANAV----P-GSYARGESF-GVHGTNGMAAALAGIQAAQEAGDAAALAVAVDRLVLLYAIALAMPGVPLIYMGDELAMVNDPGYRDDPHRQHEGRWLHRPAMDWQLAA-QRHDAKSLSGTVYRRLRGLIRQRAALGALAADQALASIALNDPRVFALTRG---DSFIALHNFSDQLLDVELAAIGVDGWTLL-----------SIVLPPYGVRWLQRG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CZG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179388 for 2887 contacts (-62.1/contact) +
2D Compatibility (PS) -39385 + (NN) -21183 + (LL) 2356
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -260000.0 ( -90.06 by residue)
QMean score : 0.383
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