Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MKKKYRIKKNDDFQKVFRRG-KSFANRQFVVYTLKQEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSFHE-LESQINPENEYIIIARKPAANMDFHEVKKSLIHVLKVGRVLKQKPNNSK
1I35 Chain:A ((1-95))
CILRFIACNGQTRAVQSRGDYQKTLAIALKKF----------SLEDASKFIVCVSQS---------SRIKLITEEEFKQICFNSSSPERDRLIIVPKEKPCPSFEDLRRSW---------------EIE
General information:
TITO was launched using:
RESULT:
Template:
1I35.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2340 for 561 contacts (-4.2/contact) +
2D Compatibility (PS) -9091 + (NN) -2729 + (LL) 2888
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -15872.0 ( -28.29 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_1I35.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I35-query.scw
PDB file :
Tito_Scwrl_1I35.pdb
: