Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLVKNLEIVESIFGDWDETIIWSCVQGIMGEVFVDSLDQPKSSLAKLGRKSSFGFLAGQPTLFLLEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTLFERSRLEKFVTQLPNGFELRAIDEKVYNSCLEKEWSQDLVANYATYQYYKKQGIGYVVYYQGNIIAGASSYSTYKNGIEI-EVDTHPDFRRRGLATIVAAQLILTCLDKGIYPSWDA---HTRTSLNLSEKLGYEFSHEYIAYEID |
1YVK Chain:A ((7-130)) | ---------------------------------------------------------------------------------------------------------------------------RIELGEETNDELYDLLLLA--D---PSKDIVDEYLERGECYTAWAGDELAGVYVLLKTRPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKCGFRIQAIDHDFFLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32591 for 808 contacts (-40.3/contact) +
2D Compatibility (PS) -12511 + (NN) -4144 + (LL) 8744
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -42902.0 ( -53.10 by residue)
QMean score : 0.386
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