Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLVKNLEIVESIFGDWDETIIWSCVQGIMGEVFVDSLDQPKSSLAKLGRKSSFGFLAGQPTLFLLEVCSGEDIILVPQHKGWSDLIESTYGQNAHSFKRYATKKDTLFERSRLEKFVTQLPNGFELRAIDEKVYNSCLEKEWSQDLVANYATYQYYKKQGIGYVVYYQGNIIAGASSYSTYKNGIEI-EVDTHPDFRRRGLATIVAAQLILTCLDKGIYPSWDA---HTRTSLNLSEKLGYEFSHEYIAYEID
1YVK Chain:A ((7-130))---------------------------------------------------------------------------------------------------------------------------RIELGEETNDELYDLLLLA--D---PSKDIVDEYLERGECYTAWAGDELAGVYVLLKTRPQTVEIVNIAVKESLQKKGFGKQLVLDAIEKAKKLGADTIEIGTGNSSIHQLSLYQKCGFRIQAIDHDFFLR


General information:
TITO was launched using:
RESULT:

Template: 1YVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32591 for 808 contacts (-40.3/contact) +
2D Compatibility (PS) -12511 + (NN) -4144 + (LL) 8744
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -42902.0 ( -53.10 by residue)
QMean score : 0.386

(partial model without unconserved sides chains):
PDB file : Tito_1YVK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YVK-query.scw
PDB file : Tito_Scwrl_1YVK.pdb: