Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEK----KNPNIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAP-GRIIQYGKNGKLADLNDLFTDQ--FIKDVNNKNIIQASKSGDKAYMYPIS-SAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTPGSFFANGQGGDQGPRAFFANLYSA-PITDK--EVTKYTTDTKNSVKSMKKIVEWIKKGYLMNGS-QYD--GSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDGK---PDLE-Y-LVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVIRTGAFPVRTSFGDLY---KGDKRMMKISKWTQYYSPYY--NTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK
3VXB Chain:A ((38-434))-------------------------------------TITAMVYGDD--A------VKVQDKAASRFNASAEAKKANAKVKMERIPASDYPAKLRTAMGSPNAPDIFFNWGGGSIKAYKEAGQLVDLTDVIKSDEVLSTGFLPSVVAAG-SLDGHEYGIPMRGMQPVLLFYNKSVFAEHKLT--PPT--TWDQLLDNVAKLKKAGVTPFALGGVEIWPELMWLEYLVDRIGGPQVFDKIRNGDASGWGDPAVLKAAQTVKQLVDEGAFGKGFSSVSYNNGGAPALLAKGKAGMHLMGSWEYSTQLGKFPDFAKKDLGWCAFPSFEGGAGDIRNVVGNPCNYWSVNA--RTGNKDGAIAFLRDCASEAYT-KDLI-DNGDVPTTTIAENMLDSSPNPEFAKFQYQLVQKAPNFTLSWDQAVDPDWQQPMLTEINKLFVGKSSPEQFVSALKGLK---------


General information:
TITO was launched using:
RESULT:

Template: 3VXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31778 for 3159 contacts (-10.1/contact) +
2D Compatibility (PS) -39759 + (NN) -12783 + (LL) 4388
1D Compatibility (HY) -11600 + (ID) 3100
Total energy: -94632.0 ( -29.96 by residue)
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_3VXB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VXB-query.scw
PDB file : Tito_Scwrl_3VXB.pdb: