Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKKKSVFTCQECGYQSPKYLGRCPNCSAWSSFVEEVEVQEVKNARVSLNGEKSRPTKLKDVSSINYSRTKTDMDEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLANK--GTVLYVSGEESAEQIKLRSERLGDIDNEFY----------------------LYAETNMQSIRSEIEKIKPDFLIIDSIQTIMSPEVSSVQGSVSQVREVTAELMQLAKTNNIATFIVG-HVTKEGTLAGPRMLEHMVDTVLYFEGERHH--TFRILRAVKNRFGS-TNEIGIFEMQSGGLV----------------------EVLNP-------------------------SQVFLEERLDGATGSAIVVTMEGTRPILAEVQA----LVTPTVFGNAKRTTTGLDFNRVSLIMAVLEKRCG------LLLQNQDAYLKSAGGVKLDEPAIDLAVAVA-------IASSYKEKPTNPQESFIGEIGLTGEIRRVTRIEQRINEASKLGFTKIYAPKNSLAGIEIP---KGIDVIGVTTVSQVLKAVFST-- |
1TF7 Chain:A ((14-497)) | --------------------------------------------------------------EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSV-----FQQYDASSVVRRELFRLVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133394 for 2915 contacts (-45.8/contact) +
2D Compatibility (PS) -41845 + (NN) -17006 + (LL) 4128
1D Compatibility (HY) -6000 + (ID) 2950
Total energy: -197067.0 ( -67.60 by residue)
QMean score : 0.348
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