Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKITTSLFQEMVQAASTRLSKQAEYVNSLNVFPVPDGDTGTNMGMTMENGAKEVSDKPATTVGEVGQILSKGVLMGARGNSGVITSQLFRGFGQSIKDKEELTGQDLAHAFQNGVEVAYKAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRATLKGAKRALAKTPEMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYIASEDFKATPATMTEMVNAEHHKAVVGHVATEDIKYGYCTEVMVGLKQGPTYVKEFNYEEFQGYLSNLGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLVKVKVENMRNQHDAQMQKVEVEETVKETKEYGIIAVVAGDGLAEIFKSQGVDY----IISGG-------------------------QTMNPSTEDIVKAIEKV--NARNVIILPNNKNI---FMAAQSAADVVD-IPAAVVETRTV--PQGFTSLLA---FDPAK-SLETNVADMTNSLSDVISGSVTLAVRDTTIDGLEIHEN-----------DILGMVDGKILVSTPDME--KALKDTFDKMIDE----DSEIVTIYVGEDGKQALAETLSEYLEETYEDVEVEIHQGDQPVYPYLMSVE |
| 3FYS Chain:A ((34-298)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SMNIAVVTDSTAYIPKEMREQHQIHMIPLQVVFREETYREEIELDWKSFYEEVKKHNELPTTSQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAAAADSMVDNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDIIKELEEMKKTVRA-YFMVDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFDNKVIVPFEKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANRE--EEAAKIIEELSAKYPHVEFYNSYFGAVIGTHLGEGA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86610 for 1493 contacts (-58.0/contact) +
2D Compatibility (PS) -22653 + (NN) -9491 + (LL) 23136
1D Compatibility (HY) -7600 + (ID) 1700
Total energy: -104918.0 ( -70.27 by residue)
QMean score : 0.395
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