Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------MADKNRTFKLVGAGSSSTQEKIEKPALSFMQDAWRRLKKNKLAVVSLYLLALLL---TFSLA---SNLFVTQKDANGFDSKKVTTYRNL-------PPKLSSNLPFWNGSIKYA--GNTESTDAYKSQNV--PEKVKYALGTDSLG------------RSVAKRIIVGIRISLLV---------AIAATFIDLIIGVTYGLVSGFAGGRLDTLMQRIVEVISSIPNLVIVTMLGLVLGN--GITAIIISIAFTGWTSMSRQVRNLTLSYR---------------EREFVLAARSLGESPI--KIAFKHILPNISGIIIVQIMMT-----IPSAIMYEAVL-SAINLGVKPPTASLGSLISDAQENL--QYYPYQVILPALALVMISLAFIL-------------LGDGLRDAFDPKSSDE--------------------------------------------- |
| 4K70 Chain:A ((2-483)) | PGSMEALVRALEEADHAVATVVQSRILEFFMAAGRETPAGVRGLWARALRLACRAYVETGTCEAAVLAENLAGLALWRLRHDWDEGTAPLLELLGVVNGDDTTAALTEAGLRTSAEFGPDAMFRLVSEWCAAFDEALAGARSADDVLAAPRVVPPEQTARALVQPRFATLYDMDFVQDGLRYVAQHTNWALPLALAVRQMQNEGLKPLTRALFALTIADEF-----FHDRQNPTLREQFAEAARAVDEAALVP-VGEVNATPRTAVEVRVSAALAHGDAYVRELRPGTVARRLRTDQGVLALLDPGAQAVHVAAAADLDHTQVDATGVWEAVQASASPLQVVEALVTAGFTRRHCDLLERAVLDRAPRLTDAQRAVGCTAVVGGVVHRLLDDYGPGLDYVRAYTDVADTLEPLYGDVTAALGLPEKGVEHVVRHCMAPRPPTEHVGAARAALLREVAAAERRAGLAHSAAREALNTWLAFRAQSRWGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165427 for 2463 contacts (-67.2/contact) +
2D Compatibility (PS) -34733 + (NN) -1897 + (LL) 204
1D Compatibility (HY) -8400 + (ID) 3350
Total energy: -213603.0 ( -86.72 by residue)
QMean score : 0.271
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