Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKQLYKSLPLLTVVLCVGALQQNVEAKAKHYKTTSHVETQYVSTSSKKILPFTHNK---QIKVGPLDNLGRATYSHIQLRDADEPKIKRERLTYNPTGWHNYKFTTEKGKTTWLMDRGHLVGYQFSG-------MNNVPENLVTMTKYLNTGFSENNPDGMLYYENRLDSWLANHKNFWLDYKVTPIYEGNN-LVPSRVELQYVGIDKQGKLLEIKLGGGKEQTDEYGVTTVTLENTSPLAKIDYKTGMLIKEDGKQAEEGEDPNSDADENEAAIESASDIEENTNTNTSESDTNNVAPKNRIVYVANKGRSNTYWYSLENIKNANTANIVQMTEQEALNQHKHHSTTEAQ |
| 3OWV Chain:A ((20-248)) | ----------SEAPSQALAESVLTDAVKSQIKGSLEWNGSGAFIVNGNKTNLDAKVSSKPYADNKTKTVGKETVPTVANALLSKATRQY------SWTPPGWHQVK--NLKGSYTHAVDRGALLGYALIGGLDGFDASTSNPKNIAVQTAWANQA-QAEYSTGQNYYESKVRKALDQNKR--VRYRVTLYYASNEDLVPSASQIEAKSSDGEL------------------EFNVLVPNVQKGLQLDYRTGEVTVTQ------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1917 for 1747 contacts (-1.1/contact) +
2D Compatibility (PS) -22427 + (NN) -8006 + (LL) 7832
1D Compatibility (HY) -1200 + (ID) 2550
Total energy: -28268.0 ( -16.18 by residue)
QMean score : 0.379
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