Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYKKYQIIYAPDVLEKLKEIRDYISQNYSSTSGQRKMEQIINDIEKLEVFPEVGFDADE-KYGSEISNYHSTRGYTLSKDYIVLYHIEEEENRVVIDYLLPTRSDYMKLFK
3OEI Chain:C ((12-95))
----VRSVNFDPDAWEDFLFWLAA-----D----RKTARRITRLIGEIQRDPFSGIGKPEPLQGELSGY----WSRRIDDEHRLVYRAGDD--EVTMLKARYHY--------
General information:
TITO was launched using:
RESULT:
Template:
3OEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27851 for 570 contacts (-48.9/contact) +
2D Compatibility (PS) -9375 + (NN) -4194 + (LL) 1272
1D Compatibility (HY) 1600 + (ID) 550
Total energy: -39098.0 ( -68.59 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3OEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OEI-query.scw
PDB file :
Tito_Scwrl_3OEI.pdb
: