Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNCIFCKIISGEIPSSKVYEDDEVLAFLDITQTTTGHTLLIPKKHVRNVLEMDEKTAQITFERLPKVARAVQAATKAKGMNIINNNEEIAGQTVFHAHVHLVPRFDESDGIKIHYTTHEPDFEALAKLAKEIRKEIQL
3LB5 Chain:D ((28-158))
-NNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHLHFHIIPRM---EG------IITPT-EILEENAKKIRAAL--
General information:
TITO was launched using:
RESULT:
Template:
3LB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58304 for 901 contacts (-64.7/contact) +
2D Compatibility (PS) -13257 + (NN) -5769 + (LL) 1168
1D Compatibility (HY) -10000 + (ID) 2850
Total energy: -89012.0 ( -98.79 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_3LB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LB5-query.scw
PDB file :
Tito_Scwrl_3LB5.pdb
: