Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYLQQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQ--DLASKISQKLYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINALMRKGYQYEDIKSALREYL
3D5L Chain:A ((63-205))------------------------------------------------------------------------------------------------------------AYSRMLDYLSYQMRTESDIVKKLKEIDTPEEFVEPILKKLRGQQLIDDHAYAASYVRTMI--NTDLKGPGIIRQHLRQKGIGESDIDDALTQFTPE----VQAELAKKLALKLFRRYRN-QPERRREQKVQQGLTTKGFSSSVYEMIKDE--


General information:
TITO was launched using:
RESULT:

Template: 3D5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17869 for 977 contacts (-18.3/contact) +
2D Compatibility (PS) -15029 + (NN) -5828 + (LL) 9192
1D Compatibility (HY) 400 + (ID) 1050
Total energy: -30184.0 ( -30.89 by residue)
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_3D5L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D5L-query.scw
PDB file : Tito_Scwrl_3D5L.pdb: