Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVSALLKFDFSVVRHNMAIKLNNNFLIIMGTSFLLLLAYHIKKEGKEVLSSLFVISNFFDNSTLFFVIIVVMRVVAGTFGGRPLKTLDGKTTRPTTDKVKGAIFNMIGPFFEGGRVLDLFSGSGSLAIEAISRGMDQAVLVEKDRRAQVVIQENIA-MTKSPEQFQLLKMEANRALEQL--TGQFDLVLLDPPYAKEEIVKQIQIMDSKGLLGDDIMIVCETDKSVDLPEEIASFGIWKQKIYGISKVTVYVR-- |
2IFT Chain:A ((11-195)) | ---------------------------------------------------------------------GEVRIIAGLWRGRKLPV---------LDRVKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDKPLITP-ENWTLLKEKTTGIVSYRLYQNLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28510 for 1392 contacts (-20.5/contact) +
2D Compatibility (PS) -18532 + (NN) -4635 + (LL) 6812
1D Compatibility (HY) 1600 + (ID) 1000
Total energy: -44265.0 ( -31.80 by residue)
QMean score : 0.225
|
|
|