Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTIEKIDEAIHRYYKQTHSVVSPDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDG----HYDVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKA--GFKADVTVRLIELLSMSAGSFGMVGGQMLDMKGENKV-LSIDDLSLIHINKTGRLLAYPFVAAGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGKTPNKDIVAEKTTYPNLLGLDKSQEILDDTLKKAQAIFQNLEKKANFNARKIIDIIEGLRLNG |
| 3KRP Chain:D ((33-269)) | ---------------------------ESMRYSLLAGGKRVRPMLCIA-----ACELVGGDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVTKSSKELGK-----------TYPKLIGVEKSKEFADRLNREAQEQLLHFHPHRAAPLIALANYIAYRDN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85586 for 1768 contacts (-48.4/contact) +
2D Compatibility (PS) -23488 + (NN) -11850 + (LL) 3876
1D Compatibility (HY) -17200 + (ID) 5200
Total energy: -139448.0 ( -78.87 by residue)
QMean score : 0.413
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