Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------MKRLHKLFITVI-----------ATLGMLGVMTFGLPTQPQNVTP-------IVHADVNSSVDT---SQEFQNNLKNAIGNL-----PFQYVNGIYEL-------NNNQTNLNADVN-----VKAYVQNTIDN------------QQRPSTANAMLDRTIRQYQNRRDTTLPDANWKPLGWHQVATNDHYGHAVDKGHLIAYALAGNFKGWDA----SVSNPQNVVTQTAHSNQSNQKINRGQNYYESL------VRKAVDQNKRVRYRVTPLYRNDTDLVPFAMHLEAKSQDGTL-EFNVAIPNTQASYTMDYATGEITLN--------------------- |
| 5CQC Chain:A ((22-402)) | SIYPPETSWEVNKGMNSSRLHKLYSLFFDKSSAFYLGDDVSVLLTGAYGFQSKKNDQQIFLFRPDSDYVAGYHVDAKSDAGWVNDKLDRRLSEISEFCSKATQPATFILPFVEMPTDITKGVQHQVLLTISYDPKSKQLTPTVYDSIGRDTYSESLSSYFKGKYRTTCDEILTQSIEKAIKSTDFTLGK-------FTRAAYNTEGNCGSYTFRTIKEVISSSAQGTTSNSYLTSQHVQDIESCIKYRNLGVVDIESALTEGKTLPVQLSEFIVALEDYGKLRSQQYSKTAKLTAVELLIGILNDIKGKNEISESQYDKLVKEVDCLMDSSLGKLVQFHLKNLGAESLQKLVLPCVKFD |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12380 for 1732 contacts (-7.1/contact) +
2D Compatibility (PS) -26895 + (NN) -4417 + (LL) 148
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -51094.0 ( -29.50 by residue)
QMean score : 0.220
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