Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATITVFSKNNCMQCKMTKKFLDQHGADFEEINIDEKPEKIE-YVKNLGFSAAPVIEAGNVVFSGFQPSKLKELV
3ZIT Chain:A ((3-75))
--KIEVYAQPDCPPCVIVKEFLKHNNVAYEEFDVKKDAAARNRLLYDYDSYSTPTVVIDGEVVAGFQIEKLQQLL
General information:
TITO was launched using:
RESULT:
Template:
3ZIT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44849 for 507 contacts (-88.5/contact) +
2D Compatibility (PS) -7594 + (NN) -1996 + (LL) 352
1D Compatibility (HY) -6400 + (ID) 850
Total energy: -61337.0 ( -120.98 by residue)
QMean score : 0.822
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIT-query.scw
PDB file :
Tito_Scwrl_3ZIT.pdb
: