Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNIELKKLAVKASENAYVPYSKFPVGAALRTAEGKIFTGCNVENISYGLANCAERTAIFKAVSEGYKDFSEIAIYGNTEEP-ISPCGACRQVMVEFFNKNAKVTLIAKNGKTVETTVGELLPYSFVDLK
1MQ0 Chain:B ((11-131))
----QLLVCSQEAKQSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAVSEGYKDFRAIAIASDMQDDFISPCGACRQVMRE-FGTNWPVYMTKPDGTYIVMTVQELLPSSFGPED
General information:
TITO was launched using:
RESULT:
Template:
1MQ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48536 for 949 contacts (-51.1/contact) +
2D Compatibility (PS) -13086 + (NN) -4612 + (LL) 292
1D Compatibility (HY) -10800 + (ID) 3500
Total energy: -80242.0 ( -84.55 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_1MQ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MQ0-query.scw
PDB file :
Tito_Scwrl_1MQ0.pdb
: