Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEMIKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVH------IP-----------------TG-IKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEALNK |
| 2JVA Chain:A ((7-101)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVHLPDAEIELTAIRAQGAGGQNVNKVSSAMHLRFDINASSLPPFYKERLLALNDSRITSDGVIVLKAQQYRTQEQNRADALLRLSELIVNAAKLEHHHHHH------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12894 for 387 contacts (-33.3/contact) +
2D Compatibility (PS) -7778 + (NN) -2774 + (LL) 21008
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -7538.0 ( -19.48 by residue)
QMean score : 0.491
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