Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLEERILKDGDVLGENILKVDSFLTHQVDFELMQEIGKVFADKYKEAGITKVVTIEASGIAPAVYAAQALGVPMIFAKKAKNITMTEGILTAEVY-SFTKQVTSQVSIVSRFLSNDDTVLIIDDFLANGQAAKGLLEIIGQAGAKVAGIGIVIEKSFQDGRDLLEKTGVPVTSLARIKAFENGRVVFAEADA
1O57 Chain:D ((95-241))
-----ERILPGGYVYLTDILGKPSVLS---------KVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKD-------GSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLSTINMKEKSIEIQNGNFLRF
General information:
TITO was launched using:
RESULT:
Template:
1O57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95161 for 1097 contacts (-86.7/contact) +
2D Compatibility (PS) -15290 + (NN) -2765 + (LL) 2352
1D Compatibility (HY) -12800 + (ID) 2500
Total energy: -126164.0 ( -115.01 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_1O57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O57-query.scw
PDB file :
Tito_Scwrl_1O57.pdb
: