Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSMDWETFLDPYIQTVGELKIKLRGIRKQFRK-----QNRHSPIEFVTGRVKSVESIQEKMVLRGISEENLAQDLQDI-AGLRIMVQFVDDVDEVLALLRKRHDMTVVQERDYITHMKSSGYRSYHVVVEYPVDTIDGQKKVLAEIQIRTLAMNFWA--------------TIEHSLNYKYQGDFPEEIKQRLEKTAKIALELDEEMRKIREDIREAQLLFDPLNRKLSDGVGNSDDTDEFYR-- |
4E40 Chain:A ((3-247)) | GEIKVELEDSDDVAAACELRAQLAGVSIASGILLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTNETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASAVKVSNLLARAKESENQYVKEAAEECSESTNYDVTAKSLAAALDKLPGVKEDNAVKTTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETESSKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2218 for 1692 contacts (-1.3/contact) +
2D Compatibility (PS) -23519 + (NN) -6088 + (LL) 0
1D Compatibility (HY) 9600 + (ID) 1050
Total energy: -23275.0 ( -13.76 by residue)
QMean score : 0.157
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