Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MTDLEKIIKA--IKSDSQNQNYTENGIDPLFAAPKTARINIVGQAPGLKTQEARLYWKDKSGDRLRQWLGVDEETFYHSGKFAV--LPLDFYYPGKGKSGDLPPRKGFAEKWHPLILK-------EMPNVQLTLLVGQYAQKYYLGSSAHKNLTETVKSYKDYLPDYLP--LVH--PSPRNQIWLKKNPWF--------------EKDLIVDLQKIVADILKD----------------- |
| 1TQM Chain:A ((1-282)) | MNIAELYGKMGKHSWRIMDAIFKNLWDYEYVPLQLISSHARIGEEKARNILKYLSDLRVVQNRQKDYEGSTFTFIGLSLYSLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVKVKEHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEGIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDRILQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27588 for 1326 contacts (-20.8/contact) +
2D Compatibility (PS) -20369 + (NN) 291 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -53216.0 ( -40.13 by residue)
QMean score : 0.286
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