Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEAIIAKKAEQVELIAEKMKAAASIVVVDSRGLTVEQDTNLRRSLRESDVEFKVIKNSILIRAAEKAG-------LEDLKELFVGPSAVAFSNEDVIAPAKVISDFAKDAEALEIKGGSVDGKFTSVEEINALAKLPNKEGMLSMLLSVLQAPVRNVAYAVKAVAEKDEEVA
3JSY Chain:A ((9-113))
----MAPWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD-KVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPFKLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIKEDKVVVKKGEVVSPK
General information:
TITO was launched using:
RESULT:
Template:
3JSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30272 for 647 contacts (-46.8/contact) +
2D Compatibility (PS) -11129 + (NN) -7839 + (LL) 400
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -56590.0 ( -87.47 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_3JSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JSY-query.scw
PDB file :
Tito_Scwrl_3JSY.pdb
: