Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKEIIDDVTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVFLAKRIQERLKQLENLDIPVGELDTKPFRDDMKVEVDTTTMPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGRPSRVSLAVLIDRGHRELPIRADYVGKNIPTSQFEEILVEVMEHDGYDRVSIIDPS
1XZN Chain:B ((1-176))
MQKAVVMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLY------------VPFPVTERNVILVDDVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELSEVDGIDQVSIHEK-
General information:
TITO was launched using:
RESULT:
Template:
1XZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114787 for 1263 contacts (-90.9/contact) +
2D Compatibility (PS) -16842 + (NN) -4635 + (LL) 992
1D Compatibility (HY) -20000 + (ID) 4550
Total energy: -159822.0 ( -126.54 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_1XZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZN-query.scw
PDB file :
Tito_Scwrl_1XZN.pdb
: