Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVALIPEKCIAC--GLCQTYSN--IFDYQDDGIVKFSDTDNLEKEVPNSDQDTVLAVKSCPTKALTIL
1H98 Chain:A ((2-56))
---HVICEPCIGVKDQSCVEVCPVECIYDGG-DQFY-IH--------PEECIDCGACVPACPVNAIYPE
General information:
TITO was launched using:
RESULT:
Template:
1H98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22795 for 315 contacts (-72.4/contact) +
2D Compatibility (PS) -5285 + (NN) -2343 + (LL) 1056
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -32717.0 ( -103.86 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1H98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H98-query.scw
PDB file :
Tito_Scwrl_1H98.pdb
: