Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHLRFWTTIIAYLVIFIL---SISTVILNLVLLFQGFLTQNPIIYLLFFITLVCAFYFAYKFITYTPTIVKNALQYIKKLKNV
2V75 Chain:A ((6-94))
---YTENLKVIVAEKLAGIPNFNED----------------IKYVAEYIVLLIVNGGTVESVVDELASLFDS-------VSRDTLANVVQTAFFALEALQQG----ESAENIVSKIRMM
General information:
TITO was launched using:
RESULT:
Template:
2V75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130911 for 613 contacts (-213.6/contact) +
2D Compatibility (PS) -9105 + (NN) -4593 + (LL) 2532
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -148527.0 ( -242.30 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_2V75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V75-query.scw
PDB file :
Tito_Scwrl_2V75.pdb
: