Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKEDIKKQVRRAFDFRMAIRVYNN-NDIPKEDMEYILDTAWLSPSSVGLEGWRFLVLDRQTIAKFRDKLKEVA-WGAQYQLDTASHFVLLLAEKG-AYYNADSMINSLVRRGLGDPAALESRIPLYKSFQENDMKIDSERSLWDWTAKQTYIALGNMMTAAAMIGVDSCPIEGFDYEKVNNILSKEGLIDDK-KEAISCMVSFGYRLREPKHSRARKERQEVITWVE |
3GBH Chain:A ((2-213)) | MQKLTRINDFNEVLNSRKSVKVFDENYKIPREEMDEIITKATKAPSSVNMQPWRIAVVQSDEM---KEKVKESFGFNSR-QLTTSSAMLIIFGDLQNYEKAEQIYGDAVE-QQLMTEDI----KAQLLDWILPYYKNLSREGMKDIVNIDSSLMAMQLMLTAKAHGYDTNPIGGFDKENIADIIGY----D-SDRYVPVLAIAIGKKAQDA-HDSVRLPIDDVREFL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GBH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83864 for 1489 contacts (-56.3/contact) +
2D Compatibility (PS) -21678 + (NN) -340 + (LL) 1288
1D Compatibility (HY) -8400 + (ID) 2200
Total energy: -115194.0 ( -77.36 by residue)
QMean score : 0.512
|
|
|