Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTTKVFSVLSLSVAAFMMTACQSNHSTKKADMSPDKVEQKTKFKNISLSSNKLLAKENTMSVLWYQNSAEAKALYLQGYNVAKMKLDDWLQKPSEKPYSIILDLDETVLDNSPYQAKNIKDGSSFTPESWDKWVQKKSAKAVAGAKAFLKYANEKGIKIYYVSDRTD-AQVDATKENLEKEGIPVQGKDHLLFLKKGMKSKESRRQAV-QKDTNLIMLFGDNLVDFA-DFSKSSSTDREQLLTKLQSEFGSKFIVFPNPMYGSWESAIYQGKHLDV-QKQLKERQKMLHSYD |
3OCU Chain:A ((12-252)) | --------------------------------------------------ANMQLQQQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHAKV-AKGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEES-AFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANYGGWEGGLAEGYFKKDTQGQIKARLDAVQAWD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OCU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11767 for 1814 contacts (-6.5/contact) +
2D Compatibility (PS) -25885 + (NN) -13755 + (LL) 3952
1D Compatibility (HY) -13600 + (ID) 3700
Total energy: -64755.0 ( -35.70 by residue)
QMean score : 0.412
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