Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKQAFIENDSIRLKLSASDWKEAIKLSIDPLIESGAVDAEYYDAIIESTEEFGPYYILMPGMAMPHARPE--AGVKRDAFSLITLTEPVVFPDG--KEVSVLLALAATSSAIHTSVAIPQIIALFELENSIQRLTECQEAKEVLAMVEESKNSPYLEGLDLES
1A3A Chain:A ((4-147))
----LFKLGAENIFLGRKAATKEEAIRFAGEQLVKGGYVEPEYVQAMLDRE-KLTPT-YLGESIAVPHGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARN-NEHIQ-VITSLTNALDDESVIERLAHTTSVDEVLELLAGRK------------
General information:
TITO was launched using:
RESULT:
Template:
1A3A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112443 for 1127 contacts (-99.8/contact) +
2D Compatibility (PS) -14830 + (NN) -1769 + (LL) 1124
1D Compatibility (HY) -9600 + (ID) 1650
Total energy: -139168.0 ( -123.49 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_1A3A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A3A-query.scw
PDB file :
Tito_Scwrl_1A3A.pdb
: