Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKELITKQKTWEIILLVVSGILIPVILAIIKMKVNSIKYISITDHNILNIDSKGKLQYINKTKIFSNLINHQLTVENKGNMKQAITEIIISQIKKVETHIPDIQLDGGFYEKFQKYLLIGYNNGNIESKVETIRLQVCSVEQNTFCENLIDEIFSDDKIIDSGSVESIFLIDLKKYYSIFDNNKKLSDLKIIALDENGNEIQGFFILVRYDRDEKMFKPHPRGLAG----------PGVEKLPLIDITKDVTKA---TAKTHQILEQGANQVGFNILVDRTCILKYKVKIKSGHKVIIDNSNYEVKIRIPEYNQEVGMLEGDFYYFIYDNVVELENHFVYSKQNIKTISPKLVFDKYRTVKEIYK |
| 1GP6 Chain:A ((20-85)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2987 for 242 contacts (-12.3/contact) +
2D Compatibility (PS) -5632 + (NN) -1563 + (LL) 16948
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 4766.0 ( 19.69 by residue)
QMean score : 0.425
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