Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------------------------------------------------------------------------------MGFLRKKTLRREFDEKLTEQLFKQKEEWNRQKKLVEK--SLEPSAEVLYELKVAEAKYFFYLR-EAKQRNLKISRWK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4R8A Chain:A ((16-553))LPEPFYYLHNFRAVLAWIGERYADLLDDQERAFIAAFAELPEASQALLVRMVMRKGTLFREGKLAYAEIGDTRAAVQPLLALGWVDAQPTLELAQLFGLLKKDELSQLFRDHLGRANL-------RKDALLERLQPLFPEARRLAEWQADFAEPVYELRCMALCDRLRLMYFGNLWQDWSEFVLADLGIYRYESVEFSADSRGFRLRADVDAYLHLFDCRQRFDLGEPLEELLAGLPGEPYANPWLEGRRVKLLFQFAQHCEKQRDFDLAQRLYRQSSHPGARLRAIRSLERGERFAEAHALAREASCAPESDAERQGLARLLPRLQGKLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREHLEEPGCAVHYVENGLINSLFGLLCWEAIFAAIPGAFFHPFHSAPADLHSADFRQRRAALFEACLGRLEDGSYRDAIRCRYRDKFGLQSPFVYWELLGEELLEQALDCLPAAHLRAWFERLLEDIPGNRAGLPDLIQFWPAQRRYRMVEVKGPGDRLQDNQLRWLQFCREREMPVAVCYV


General information:
TITO was launched using:
RESULT:

Template: 4R8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1474 for 299 contacts (4.9/contact) +
2D Compatibility (PS) -7009 + (NN) -431 + (LL) 532
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -11184.0 ( -37.40 by residue)
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_4R8A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R8A-query.scw
PDB file : Tito_Scwrl_4R8A.pdb: