Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METNNHFFYVVKCKDNSWYAGYTNDLHKRVKTHNDGKGAKYTKVRRPVELIFAESFSTKREAMQAEYYFKKLTRKKKELYIEEKRNSKEAVYVKAPNEL
1QP2 Chain:A ((1-77))
MVQRGSKVRILR-PESYWF----QDVGTVASVDQSG-------IKYPVIVRFEKVNYSGIN----TNNFA-----EDELVEVEAPKAKPKK--------
General information:
TITO was launched using:
RESULT:
Template:
1QP2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3283 for 408 contacts (8.0/contact) +
2D Compatibility (PS) -7456 + (NN) -854 + (LL) 2104
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -5523.0 ( -13.54 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_1QP2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QP2-query.scw
PDB file :
Tito_Scwrl_1QP2.pdb
: